One more (possibly related) thing I noticed: in the roster organizer, you can’t add a bench or minors target without having a currently owned player in the section. Then, if you move a player there, add a target, and move the currently owned player back into your lineup, all your bench targets disappear.
The targets aren’t deleted but they don’t display. I will look into this at some point today, though I might have to wait until tomorrow to deploy a fix given the full auction draft schedule today.